RScriptsData.zip:
Contains the folders Prec@N, PrecRec, ROC, Strategies.
In each folder, the data we used for plotting and computation is located as well as the R-script itself.
Since the paths are all relative, start R and set the working directory to the according folder with the
command: setwd(PATH)
When executing the scripts, the plots are shown and the AUC for the matching systems is written to the console.

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Application.zip:
Contains the Java-appliation itself as well as all required data, which is necessary e.g. to generate the files
for plotting. 


Compute Measures:
java -cp Measures.jar measures.MeanAbsoluteError

-> prints the mean absolute error for the matching systems

File generation for plotting and AUC computation of the single matching systems:
java -cp Measures.jar fileWriter.PrecAtNFiles
java -cp Measures.jar fileWriter.PrecisionRecallFiles
java -cp Measures.jar fileWriter.ROCFiles

-> uses the alingment in folder "in" and the reference alignment "referenceAll.rdf"

Combined strategies:

java -cp Measures.jar combination.ConfidenceValueMatcher
java -cp Measures.jar combination.FMeasureMatcher
java -cp Measures.jar combination.LeadershipMatcher
java -cp Measures.jar combination.PrecisionMatcher
java -cp Measures.jar combination.RandomMatcher
java -cp Measures.jar combination.RecallMatcher
java -cp Measures.jar combination.VoteMatcher

applies the strategies on the alignment located in the folder "in" and uses
the reference alignment "referenceAll.rdf"
-> generates a file in out which can be used within the R-scripts to plot the Precision@n curve as well as
to compute the AUC

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src.zip
Contains the source code of the Java-application.